Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922622.1_cds_XP_016471373.1_63720
CDS Infomation

[gene=LOC107793520] [db_xref=GeneID:107793520] [protein=tRNA modification GTPase MnmE-like isoform X3] [protein_id=XP_016471373.1] [location=complement(join(18101..18295,19477..19707,20114..20232,20896..21034,22237..22440,22614..22735,23005..23143,24589..24881,25642..25822))] [gbkey=CDS]
Sequence

ATGGCTTTGCTACCTGTATTCCGCCATTTCCTTACCCACCTACGTTCCCCTTTGCCCCCA
CCCATAGCCTCCTCCATCTTCCCAAAATTGTCAATCCCAATTCACTCAACTTTCTCTTCT
CTATTCCCTCTTTCTTCTTCTTCTCAACCCACTACTCCCAAACCTCATGCTACTGCTAAA
GAGAGTACTCTGGTGCTGAAGCAAGATGAGAGGTTATTTGGGTCTGGAACAGTGAGCCCT
CTTGACCCAGCTGTGAATACTAGTACCATTGCTGCTATTGTCACTTCTTTGGGTGGTCCA
GCAGCTGCAGTTGGGATTATTCGGTTATCTGGTCCGTCTGCAGTTCCTATAGTTGGTCGT
GTTTTTCATCCCAAGTTGAACAAGAAGAAAAGGAGTTCTTCCGATTGGAGGCCTAAAAGC
CATGTTATAGAGTATGGTGTTGTTTCTGACTCTAATGGGAATGTGATTGATGAGGTTCTA
GTGATTCCTATGCTGGCCCCAAAGTCATACACTAGAGAAGATGTGGTTGAGCTTCAGTGT
CATGGAAGTGAAGTGTGTCTTCAACGTGTTTTGAGGGCTTGTTTGGAGGCTGGTGCGAGG
CTCGCGGAGCCAGGCGAGTTCACTCTCCGGGCCTTTTTAAATGGTCGTTTGGATCTCTCT
CAAGCTGAGAATGTGGAAAAGTTAATATCGGCCAAGTCAGTGGCTGCTGCAGATGCTGCA
TTGGCAGGAATCGAGGGGTTTTTTTCTTCTTTGGTCAAATCACTAAGAACACAGTGCATC
GAGTTGCTAGCTGAAATTGAGGCTCGCCTTGATTTCGACGATGAGATGCCACCCATTGAT
CTAAATCTTATTATGAACAAAATATATGGGATGCTGCATGATCTGGATGATGCACTGGAA
ACTGCCAACTATGACAAGCTTCTGCAGTCAGGACTACAGACTGATAGAGCAATAGTTACA
AATATTGCTGGTACTACGCGGGATGTTGTAGAAGCCAATGTTTCTATCCGTGGTGTTCCT
GTTACACTTCTTGATACAGCAGGAATCAGGGAGACTGATGATGTTGTGGAAAAAATTGGT
GTGGAAAGATCTGAAGCTGTTGCTATAAATGCTGATGTCGTAATAATGACCATAAGTGCA
GCAGAGGGATGGACTCTGGAGGATACACAGCTTCTTGAGAGAATCCAAAGGAATCAGTTT
CAGACCGCAGCTGGATGTAGCTCTCCACTGATTCTGGTAATCAACAAAATAGACTGCGCT
CCCTCCGACTCTTATGAATGGGTCAATACATGCGGCTTCTCCTTCAACAAGCACATTCCA
ACATGTGCTGTCAATGGTCAAGGGATTCAAGAACTTGAGGCAGCAATAATAGAAATTATG
GGTCTCAATAAGATCCCTGTTGGTGGTCGCAGATGGACAGTCAACCAGAGACAATGTGAG
CAGCTTATTCGAACCAAGGAGGCTTTCGTGAGGTTAAAATCATCAATTCAGGAAGATATG
CCCCTTGATTTCTGGACAATAGACCTAAGGGAAGCTGCTTTGGCACTTGGACAAATAAGT
GGAGAAGATATTTCTGAAGAAATATTGTCCAACATTTTTGGTAAATTTTGTATTGGCAAA
TAG

Peptide Sequence

PEP ID

XP_016471373.1
PEP Infomation

PREDICTED: tRNA modification GTPase MnmE-like isoform X3 [Nicotiana tabacum]
Sequence

MALLPVFRHFLTHLRSPLPPPIASSIFPKLSIPIHSTFSSLFPLSSSSQPTTPKPHATAK
ESTLVLKQDERLFGSGTVSPLDPAVNTSTIAAIVTSLGGPAAAVGIIRLSGPSAVPIVGR
VFHPKLNKKKRSSSDWRPKSHVIEYGVVSDSNGNVIDEVLVIPMLAPKSYTREDVVELQC
HGSEVCLQRVLRACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVEKLISAKSVAAADAA
LAGIEGFFSSLVKSLRTQCIELLAEIEARLDFDDEMPPIDLNLIMNKIYGMLHDLDDALE
TANYDKLLQSGLQTDRAIVTNIAGTTRDVVEANVSIRGVPVTLLDTAGIRETDDVVEKIG
VERSEAVAINADVVIMTISAAEGWTLEDTQLLERIQRNQFQTAAGCSSPLILVINKIDCA
PSDSYEWVNTCGFSFNKHIPTCAVNGQGIQELEAAIIEIMGLNKIPVGGRRWTVNQRQCE
QLIRTKEAFVRLKSSIQEDMPLDFWTIDLREAALALGQISGEDISEEILSNIFGKFCIGK

Transcript Sequence

Gene sequence data has not been registered.